RPA

This is the development version of RPA; for the stable release version, see RPA.

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Development (3.21)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.

Author: Leo Lahti [aut, cre] (ORCID: )

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Citation (from within R, enter citation("RPA")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RPA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version	1.63.0
In Bioconductor since	BioC 2.5 (R-2.10) (15 years)
License	BSD_2_clause + file LICENSE
Depends	R (>= 3.1.1), affy, BiocGenerics, BiocStyle, methods, rmarkdown
Imports	phyloseq
System Requirements
URL	https://github.com/antagomir/RPA
Bug Reports	https://github.com/antagomir/RPA

Suggests	knitr, parallel
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/RPA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RPA
Package Short Url	https://bioconductor.org/packages/RPA/
Package Downloads Report	Download Stats