WeberDivechaLCdata
This is the development version of WeberDivechaLCdata; for the stable release version, see WeberDivechaLCdata.
Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples
Bioconductor version: Development (3.21)
Spatially-resolved transcriptomics (SRT) and single-nucleus RNA-sequencing (snRNA-seq) data from the locus coeruleus (LC) in postmortem human brain samples. Data were generated with the 10x Genomics Visium SRT and 10x Genomics Chromium snRNA-seq platforms. Datasets are stored in SpatialExperiment and SingleCellExperiment formats.
Author: Lukas M. Weber [aut, cre] (ORCID:
Maintainer: Lukas M. Weber <lmweberedu at gmail.com>
citation("WeberDivechaLCdata")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("WeberDivechaLCdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("WeberDivechaLCdata")| WeberDivechaLCdata package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, RNASeqData, ReproducibleResearch, SequencingData, SingleCellData, SpatialData |
| Version | 1.7.0 |
| License | MIT + file LICENSE |
| Depends | ExperimentHub, SpatialExperiment, SingleCellExperiment |
| Imports | utils |
| System Requirements | |
| URL | https://github.com/lmweber/WeberDivechaLCdata |
| Bug Reports | https://github.com/lmweber/WeberDivechaLCdata/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | nnSVG |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | WeberDivechaLCdata_1.7.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/WeberDivechaLCdata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/WeberDivechaLCdata |
| Package Short Url | https://bioconductor.org/packages/WeberDivechaLCdata/ |
| Package Downloads Report | Download Stats |