SimBenchData
This is the development version of SimBenchData; for the stable release version, see SimBenchData.
SimBenchData: a collection of 35 single-cell RNA-seq data covering a wide range of data characteristics
Bioconductor version: Development (3.21)
The SimBenchData package contains a total of 35 single-cell RNA-seq datasets covering a wide range of data characteristics, including major sequencing protocols, multiple tissue types, and both human and mouse sources.
Author: Yue Cao [aut, cre], Pengyi Yang [aut], Jean Yee Hwa Yang [aut]
Maintainer: Yue Cao <ycao6928 at uni.sydney.edu.au>
citation("SimBenchData")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SimBenchData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SimBenchData")| SimBenchData: a collection of single-cell RNA-seq data covering a wide range of data characteristics | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExperimentHub, RNASeqData, SequencingData, SingleCellData, Tissue |
| Version | 1.13.0 |
| License | GPL-3 |
| Depends | ExperimentHub |
| Imports | S4Vectors, utils |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, knitr, rmarkdown, Seurat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | SimBenchData_1.13.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/SimBenchData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SimBenchData |
| Package Short Url | https://bioconductor.org/packages/SimBenchData/ |
| Package Downloads Report | Download Stats |