intansv

This is the development version of intansv; for the stable release version, see intansv.

Integrative analysis of structural variations

Bioconductor version: Development (3.21)

This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.

Author: Wen Yao <ywhzau at gmail.com>

Maintainer: Wen Yao <ywhzau at gmail.com>

Citation (from within R, enter citation("intansv")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("intansv")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("intansv")

An Introduction to intansv	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Annotation, Genetics, Sequencing, Software
Version	1.47.0
In Bioconductor since	BioC 2.13 (R-3.0) (11 years)
License	MIT + file LICENSE
Depends	R (>= 2.14.0), plyr, ggbio, GenomicRanges
Imports	BiocGenerics, IRanges
System Requirements
URL

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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	intansv_1.47.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/intansv
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/intansv
Bioc Package Browser	https://code.bioconductor.org/browse/intansv/
Package Short Url	https://bioconductor.org/packages/intansv/
Package Downloads Report	Download Stats