BiocPkgTools
This is the development version of BiocPkgTools; for the stable release version, see BiocPkgTools.
Collection of simple tools for learning about Bioconductor Packages
Bioconductor version: Development (3.21)
Bioconductor has a rich ecosystem of metadata around packages, usage, and build status. This package is a simple collection of functions to access that metadata from R. The goal is to expose metadata for data mining and value-added functionality such as package searching, text mining, and analytics on packages.
Author: Shian Su [aut, ctb], Lori Shepherd [ctb], Marcel Ramos [aut, ctb] (ORCID:
Maintainer: Sean Davis <seandavi at gmail.com>
citation("BiocPkgTools")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("BiocPkgTools")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocPkgTools")| Overview of BiocPkgTools | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Infrastructure, Software |
| Version | 1.23.1 |
| In Bioconductor since | BioC 3.8 (R-3.5) (6 years) |
| License | MIT + file LICENSE |
| Depends | htmlwidgets |
| Imports | BiocFileCache, BiocManager, biocViews, tibble, magrittr, methods, rlang, stringr, stats, rvest, dplyr, xml2, readr, httr, htmltools, DT, tools, utils, igraph, jsonlite, gh, RBGL, graph, rorcid |
| System Requirements | mailsend-go |
| URL | https://github.com/seandavi/BiocPkgTools |
| Bug Reports | https://github.com/seandavi/BiocPkgTools/issues/new |
See More
| Suggests | BiocStyle, knitr, rmarkdown, testthat, tm, lubridate, networkD3, visNetwork, clipr, blastula, kableExtra, DiagrammeR, SummarizedExperiment |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | rworkflows |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BiocPkgTools_1.23.1.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocPkgTools |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocPkgTools |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocPkgTools/ |
| Package Short Url | https://bioconductor.org/packages/BiocPkgTools/ |
| Package Downloads Report | Download Stats |