AnVILAz
This is the development version of AnVILAz; for the stable release version, see AnVILAz.
R / Bioconductor Support for the AnVIL Azure Platform
Bioconductor version: Development (3.21)
The AnVIL is a cloud computing resource developed in part by the National Human Genome Research Institute. The AnVILAz package supports end-users and developers using the AnVIL platform in the Azure cloud. The package provides a programmatic interface to AnVIL resources, including workspaces, notebooks, tables, and workflows. The package also provides utilities for managing resources, including copying files to and from Azure Blob Storage, and creating shared access signatures (SAS) for secure access to Azure resources.
Author: Martin Morgan [aut, ctb] (ORCID:
Maintainer: Marcel Ramos <marcel.ramos at sph.cuny.edu>
citation("AnVILAz")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("AnVILAz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AnVILAz")| Introduction to the AnVILAz package | HTML | R Script |
| Working with Workspaces on AnVIL Azure | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software, ThirdPartyClient |
| Version | 1.1.0 |
| In Bioconductor since | BioC 3.20 (R-4.4) (< 6 months) |
| License | Artistic-2.0 |
| Depends | |
| Imports | AnVILBase, BiocBaseUtils, curl, httr2, jsonlite, methods, rjsoncons, tibble, utils |
| System Requirements | az, azcopy |
| URL | https://github.com/Bioconductor/AnVILAz |
| Bug Reports | https://github.com/Bioconductor/AnVILAz/issues |
See More
| Suggests | BiocStyle, dplyr, knitr, readr, rmarkdown, tinytest |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | AnVILBase, AnVIL |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AnVILAz_1.1.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/AnVILAz |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/AnVILAz |
| Bioc Package Browser | https://code.bioconductor.org/browse/AnVILAz/ |
| Package Short Url | https://bioconductor.org/packages/AnVILAz/ |
| Package Downloads Report | Download Stats |