ReactomeGSA.data

This is the development version of ReactomeGSA.data; for the stable release version, see ReactomeGSA.data.

Companion data package for the ReactomeGSA package

Bioconductor version: Development (3.21)

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

Author: Johannes Griss [aut, cre] (ORCID: )

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Citation (from within R, enter citation("ReactomeGSA.data")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ReactomeGSA.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, ExpressionData, Homo_sapiens_Data, Proteome, RNASeqData
Version	1.19.0
License	Artistic-2.0
Depends	R (>= 3.6), limma, edgeR, ReactomeGSA, Seurat
Imports
System Requirements
URL	https://github.com/reactome/ReactomeGSA.data/issues
Bug Reports	https://github.com/reactome/ReactomeGSA.data

Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	ReactomeGSA
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ReactomeGSA.data_1.19.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/ReactomeGSA.data
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ReactomeGSA.data
Package Short Url	https://bioconductor.org/packages/ReactomeGSA.data/
Package Downloads Report	Download Stats