LiebermanAidenHiC2009
This is the development version of LiebermanAidenHiC2009; for the stable release version, see LiebermanAidenHiC2009.
Selected data from the HiC paper of E. Lieberman-Aiden et al. in Science (2009)
Bioconductor version: Development (3.21)
This package provides data that were presented in the article "Comprehensive mapping of long-range interactions reveals folding principles of the human genome", Science 2009 Oct 9;326(5950):289-93. PMID: 19815776
Author: Wolfgang Huber, Felix Klein
Maintainer: Felix Klein <fklein at embl.de>
citation("LiebermanAidenHiC2009")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("LiebermanAidenHiC2009")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("LiebermanAidenHiC2009")| Exploration of HiC data | R Script | |
| Reference Manual |
Details
| biocViews | ChIPSeqData, ChipOnChipData, DNASeqData, ENCODE, ExperimentData, GEO, Genome, NCI, SequencingData, SmallRNAData, miRNAData |
| Version | 0.45.0 |
| License | LGPL |
| Depends | KernSmooth, IRanges |
| Imports | |
| System Requirements | |
| URL |
See More
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | LiebermanAidenHiC2009_0.45.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/LiebermanAidenHiC2009 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LiebermanAidenHiC2009 |
| Package Short Url | https://bioconductor.org/packages/LiebermanAidenHiC2009/ |
| Package Downloads Report | Download Stats |