flowPeaks
This is the development version of flowPeaks; for the stable release version, see flowPeaks.
An R package for flow data clustering
Bioconductor version: Development (3.21)
A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.
Author: Yongchao Ge<yongchao.ge at gmail.com>
Maintainer: Yongchao Ge<yongchao.ge at gmail.com>
Citation (from within R, enter
citation("flowPeaks")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("flowPeaks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowPeaks")| Tutorial of flowPeaks package | R Script | |
| Reference Manual | ||
| README | Text |
Details
| biocViews | Clustering, FlowCytometry, Gating, ImmunoOncology, Software |
| Version | 1.53.0 |
| In Bioconductor since | BioC 2.11 (R-2.15) (12 years) |
| License | Artistic-1.0 |
| Depends | R (>= 2.12.0) |
| Imports | |
| System Requirements | gsl |
| URL |
See More
| Suggests | flowCore |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ddPCRclust |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | flowPeaks_1.53.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/flowPeaks |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowPeaks |
| Bioc Package Browser | https://code.bioconductor.org/browse/flowPeaks/ |
| Package Short Url | https://bioconductor.org/packages/flowPeaks/ |
| Package Downloads Report | Download Stats |