apComplex
This is the development version of apComplex; for the stable release version, see apComplex.
Estimate protein complex membership using AP-MS protein data
Bioconductor version: Development (3.21)
Functions to estimate a bipartite graph of protein complex membership using AP-MS data.
Author: Denise Scholtens <dscholtens at northwestern.edu>
Maintainer: Denise Scholtens <dscholtens at northwestern.edu>
Citation (from within R, enter
citation("apComplex")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("apComplex")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("apComplex")| apComplex | R Script | |
| Reference Manual |
Details
| biocViews | GraphAndNetwork, ImmunoOncology, MassSpectrometry, NetworkInference, Software |
| Version | 2.73.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19.5 years) |
| License | LGPL |
| Depends | R (>= 2.10), graph, RBGL |
| Imports | Rgraphviz, stats, org.Sc.sgd.db |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | apComplex_2.73.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/apComplex |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/apComplex |
| Bioc Package Browser | https://code.bioconductor.org/browse/apComplex/ |
| Package Short Url | https://bioconductor.org/packages/apComplex/ |
| Package Downloads Report | Download Stats |