tinyVAST: Multivariate Spatio-Temporal Models using Structural Equations
Fits a wide variety of multivariate spatio-temporal models with simultaneous and lagged interactions among variables (including vector autoregressive spatio-temporal ('VAST') dynamics) for areal, continuous, or network spatial domains. It includes time-variable, space-variable, and space-time-variable interactions using dynamic structural equation models ('DSEM') as expressive interface, and the 'mgcv' package to specify splines via the formula interface. See Thorson et al. (2024) <doi:10.48550/arXiv.2401.10193> for more details.
| Version: | 1.0.0 |
| Depends: | R (≥ 4.1.0) |
| Imports: | corpcor, fmesher, igraph, Matrix (≥ 1.3.0), methods, mgcv, sem, sf, sfnetworks, TMB (≥ 1.9.17), units, checkmate, abind, sdmTMB |
| LinkingTo: | RcppEigen, TMB |
| Suggests: | dsem (≥ 1.1.0), ggplot2, knitr, lattice, mvtnorm, pdp, rmarkdown, rnaturalearth, rnaturalearthdata, testthat, tweedie, viridisLite, visreg, plyr, DHARMa, glmmTMB, tibble |
| Published: | 2025-03-13 |
| Author: | James T. Thorson 
[aut, cre],
Sean C. Anderson
[aut] |
| Maintainer: | James T. Thorson <James.Thorson at noaa.gov> |
| BugReports: | https://github.com/vast-lib/tinyVAST/issues |
| License: | GPL-3 |
| URL: | https://vast-lib.github.io/tinyVAST/ |
| NeedsCompilation: | yes |
| Citation: | tinyVAST citation info |
| Materials: | NEWS |
| CRAN checks: | tinyVAST results |
Documentation:
| Reference manual: | tinyVAST.pdf |
| Vignettes: |
Dynamic structural equation models (source, R code) Comparison with mgcv (source, R code) tinyVAST model description (source, R code) Multiple data types (source, R code) Simultaneous autoregressive process (source, R code) Spatial modeling (source, R code) Spatial factor analysis (source, R code) |
Downloads:
| Package source: | tinyVAST_1.0.0.tar.gz |
| Windows binaries: | r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: | r-devel (arm64): not available, r-release (arm64): not available, r-oldrel (arm64): not available, r-devel (x86_64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
Linking:
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