PerlMol version 0.3500 ====================== PerlMol is a collection of Perl modules for chemoinformatics and computational chemistry with the philosophy that "simple things should be simple". It should be possible to write one-liners that use this toolkit to do meaningful "molecular munging". The perlmol toolkit provides objects and methods for representing molecules, atoms, and bonds in Perl; doing substructure matching; and reading and writing files in various formats. This is a bundle containing all of the modules of the PerlMol Project and their dependencies. CONTENTS AND CHANGES SINCE VERSION 0.3200 (See the Changes file for more details.) * NEW!!! Added an examples/ directory New distributions: Chemistry-File-VRML 0.10 Chemistry-3DBuilder 0.10 Changed versions: Chemistry-Mol 0.35 Chemistry-Mok 0.25 Chemistry-File-SMILES 0.44 Chemistry-File-SMARTS 0.22 Chemistry-File-PDB 0.21 Chemistry-Pattern 0.26 Chemistry-MidasPattern 0.11 Chemistry-File-MDLMol 0.20 Chemistry-Isotope 0.11 Unchanged versions: Chemistry-InternalCoords 0.18 Chemistry-MacroMol 0.06 Chemistry-Ring 0.18 Chemistry-Canonicalize 0.10 Chemistry-Bond-Find 0.21 Chemistry-File-SLN 0.10 Chemistry-FormulaPattern 0.10 Chemistry-File-Mopac 0.15 Chemistry-File-XYZ 0.11 Math-VectorReal 1.02 Statistics-Regression 0.15 Parse-Yapp 1.05 INSTALLATION To install this module type the following: perl Makefile.PL make make test make install DEPENDENCIES perl-5.6.0 or a more recent version. If you have perl-5.8.0 (or a more recent version), this bundle has everything you need. If you have an earlier version of Perl, you also need these core modules: Test::Simple 0.45 Scalar::Util 1.07 Storable 2.04 Text::Balanced 1.89 COPYRIGHT AND LICENSE Copyright (C) 2005 Ivan Tubert-Brohman This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.